Available predicates

CardioSHARE demo predicates
<http://biordf.net/moby/UniProt/$UNIPROT_ID>
  • <http://es-01.chibi.ubc.ca/~benv/predicates.owl#isEncodedBy> <http://biordf.net/moby/KEGG/$KEGG_GENE_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasGOTerm> <http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasMotif> <http://biordf.net/moby/Prosite/$PROSITE_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasName> "$NAME"
  • <http://sadiframework.org/ontologies/predicates.owl#hasDescription> "$DESCRIPTION"
  • <http://sadiframework.org/ontologies/predicates.owl#hasSequence> "$AMINO_ACID_SEQUENCE"
  • <http://sadiframework.org/ontologies/predicates.owl#belongsToOrganism> "$TAXON_SCIENTIFIC_NAME"
  • <http://sadiframework.org/ontologies/predicates.owl#has3DStructure> <http://biordf.net/moby/PDB/$PDB_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasHomologyDerivedStructure> <http://biordf.net/moby/HSSP/$HSSP_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasMolecularInteractionWith> <http://biordf.net/moby/GI/$GI_PROTEIN_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#isTargetOfDrug> <http://www.drugbank.ca/drugs/$DRUGBANK_ID>
<http://www.drugbank.ca/drugs/$DRUGBANK_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#hasDrugBrandName> <$BRAND_NAME>
  • <http://sadiframework.org/ontologies/service_objects.owl#hasDrugGenericName> <$GENERIC_NAME>
  • <http://sadiframework.org/ontologies/predicates.owl#has3DStructure> <http://biordf.net/moby/PDB/$PDB_ID>
<http://biordf.net/moby/PDB/$PDB_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#is3DStructureFor> <http://biordf.net/moby/UniProt/$UNIPROT_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasStructuralClassification> <http://biordf.net/moby/CATH/$CATH_CODE>
  • <http://sadiframework.org/ontologies/service_objects.owl#hasJmol3DStructureVisualization> <$IMAGE_URL>
  • <http://sadiframework.org/ontologies/predicates.owl#hasLigand> <http://biordf.net/moby/PDB/$PDB_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#isLigandOf> <http://biordf.net/moby/PDB/$PDB_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasCharge> "$CHARGE_NUMBER"
  • <http://sadiframework.org/ontologies/predicates.owl#hasChemicalName> "$CHEMICAL_NAME"
  • <http://sadiframework.org/ontologies/predicates.owl#hasMolecularWeight> "$MOLECULAR_WEIGHT"
  • <http://sadiframework.org/ontologies/predicates.owl#hasChemicalFormula> "$CHEMICAL_FORMULA"
  • <http://sadiframework.org/ontologies/predicates.owl#numAtoms> "$NUMBER_OF_ATOMS"
<http://biordf.net/moby/Global_Keyword/$KEYWORD>
  • <http://ontology.dumontierlab.com/isTagOf> <http://biordf.net/moby/UniProt/$UNIPROT_ID>
<http://biordf.net/moby/PMID/$PUBMED_ID>
  • <http://ontology.dumontierlab.com/isReferenceFor> <http://biordf.net/moby/UniProt/$UNIPROT_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasTitle> "$PAPER_TITLE"
  • <http://sadiframework.org/ontologies/predicates.owl#publishedIn> "$JOURNAL_TITLE"
  • <http://sadiframework.org/ontologies/predicates.owl#hasPublicationYear> "$YEAR"
<http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasAssociatedProtein> <http://biordf.net/moby/UniProt/$UNIPROT_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasParentTerm> <http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasAncestorTerm> <http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasChildTerm> <http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasDescendantTerm> <http://biordf.net/moby/GO/$GO_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasTermName> "$GO_TERM_NAME"
  • <http://sadiframework.org/ontologies/predicates.owl#hasTermDefinition> "$GO_TERM_DEFINITION"
  • <http://sadiframework.org/ontologies/predicates.owl#hasTermType> "$GO_TERM_TYPE"
<http://biordf.net/moby/KEGG/$KEGG_GENE_ID>
  • <http://ontology.dumontierlab.com/isPartipantIn> <http://biordf.net/moby/KEGG_PATHWAY/$KEGG_PATHWAY_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#encodes> <http://biordf.net/moby/UniProt/$UNIPROT_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#hasRefSeqProtein> <http://biordf.net/moby/NCBI_NP/$REFSEQ_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#hasRefSeqTranscript> <http://biordf.net/moby/NCBI_NM/$REFSEQ_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#isOrthologOf> <http://biordf.net/moby/KEGG/$KEGG_GENE_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#isParalogOf> <http://biordf.net/moby/KEGG/$KEGG_GENE_ID>
<http://biordf.net/moby/NCBI_NM/$REFSEQ_ID>
  • <http://sadiframework.org/ontologies/service_objects.owl#correspondsToEntrezGene> <http://biordf.net/moby/GeneID/$Entrez_GENE_ID>
<http://biordf.net/moby/KEGG_PATHWAY/$KEGG_PATHWAY_ID>
  • <http://ontology.dumontierlab.com/hasParticipant> <http://biordf.net/moby/KEGG/$KEGG_GENE_ID>
  • <http://ontology.dumontierlab.com/hasParticipant> <http://biordf.net/moby/KEGG_COMPOUND/$KEGG_COMPOUND_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasPathwayGene> <http://biordf.net/moby/KEGG_COMPOUND/$KEGG_GENE_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#hasMetabolite> <http://biordf.net/moby/KEGG_COMPOUND/$KEGG_COMPOUND_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#visualizedByPathwayDiagram> <$IMAGE_URL>
<http://biordf.net/moby/KEGG_COMPOUND/$KEGG_COMPOUND_ID>
  • <http://sadiframework.org/ontologies/predicates.owl#isSubstance> <http://biordf.net/moby/PubChem_Substance/$PUBCHEM_SUBSTANCE_ID>